species:   Pimic
pid:       PID1830
parent:    Pmic_miR-7
paralog:   
locus:     scaffold_106:26653-26727
matures:   ['UCCAGCAAGGGGGAAUGGGCU', 'CUCGUUCCCUUUGCUGGACG']
srr:       SRX5082412
genome:    /Users/jax/+Genomes/Fungal_genomes/Pimic.Pismi1_AssemblyScaffolds.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Wong-Bajracharya2022-kz.SRX5082412.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Wong-Bajracharya2022-kz.SRX5082412.cram scaffold_106:26653-26727

0 out of bounds
7 alignments
7 proper strand
3 stranded perfect matches

                ********************************************               
AUUAAAAUUUGCCAAGCGUCCAGCAAGGGGGAAUGGGCUACUCGUUCCCUUUGCUGGACGCUUGGCGUCGCCCAC
..........((((((((((((((((((((.((((((...)))))))))))))))))))))))))).........
------------------UCCAGCAAGGGGGAAUGGGCU------------------------------------ l=21 a=0 c
----------------------------------------CUCGUUCCCUUUGCUGGACG--------------- l=20 a=1 c*
-----------------------------------GGCUACUCGUUCCCUUUGCUGGACG--------------- l=25 a=2 ma
----------------------------------------CUCGUUCCCUUUGCUGGACG--------------- l=20 a=1 ma*

-----------------------------------GGCUACUCGUUCCCUUUGCUGGACG--------------- l=25 a=2 (ma)
----------------------------------------CUCGUUCCCUUUGCUGGACG--------------- l=20 a=1 (c*,ma*)
----------------------------------------CUCGUUCCCUUUGCcGGACG--------------- l=20 a=4 

mb-00011
ax-1011001
ku-01
ss-101011111100
fn-011
